Zm00001d009074_T002

Description : pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein

Gene families : OG_01_0014084 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014084_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d009074_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d009074_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_213

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016437	MCT-1/Tma20	PANTHER	1	180
IPR002478	PUA	Pfam	93	170
IPR015947	PUA-like_sf	SUPERFAMILY	91	177
IPR016437	MCT-1/Tma20	PIRSF	1	181
IPR004521	Uncharacterised_CHP00451	NCBIfam	62	172
IPR041366	Pre-PUA	Pfam	7	88
IPR002478	PUA	SMART	92	171
IPR004521	Uncharacterised_CHP00451	TIGRFAM	62	172
IPR002478	PUA	Pfam	93	170
IPR041366	Pre-PUA	Pfam	7	88
IPR016437	MCT-1/Tma20	PIRSF	1	181
IPR016437	MCT-1/Tma20	PANTHER	1	178
IPR015947	PUA-like_sf	SUPERFAMILY	91	177
IPR002478	PUA	SMART	92	171

No CAZYmes available for this sequence

External Links

No external refs found!