1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d009747_T001

Zm00001d009747_T001


Description : homology to ABI2


Gene families : OG_01_0001425 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001425_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d009747_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d009747_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_252
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_121


Type GO Term Name Evidence Source
MF GO:0016791 phosphatase activity ISM GOs from InterProScan
MF GO:0043169 cation binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015655 PP2C PANTHER 89 412
IPR036457 PPM-type-like_dom_sf SUPERFAMILY 95 415
IPR001932 PPM-type_phosphatase-like_dom SMART 92 411
IPR036457 PPM-type-like_dom_sf Gene3D 93 423
IPR001932 PPM-type_phosphatase-like_dom CDD 102 413
IPR000222 PP2C_BS ProSitePatterns 153 161
IPR001932 PPM-type_phosphatase-like_dom Pfam 148 406
IPR001932 PPM-type_phosphatase-like_dom ProSiteProfiles 102 413
IPR036457 PPM-type-like_dom_sf Gene3D 93 423
IPR000222 PP2C_BS ProSitePatterns 153 161
IPR001932 PPM-type_phosphatase-like_dom SMART 92 411
IPR036457 PPM-type-like_dom_sf SUPERFAMILY 95 415
IPR001932 PPM-type_phosphatase-like_dom Pfam 148 406
IPR001932 PPM-type_phosphatase-like_dom ProSiteProfiles 102 413
IPR001932 PPM-type_phosphatase-like_dom CDD 102 413

No CAZYmes available for this sequence

No external refs found!