Zm00001d010046_T001

Description : xylose isomerase family protein

Gene families : OG_01_0003550 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003550_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d010046_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d010046_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_313
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_269

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009045	xylose isomerase activity	ISM	GOs from InterProScan
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016860	intramolecular oxidoreductase activity	None	Extended
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036237	Xyl_isomerase-like_sf	SUPERFAMILY	82	336
IPR011990	TPR-like_helical_dom_sf	Gene3D	5	84
IPR001998	Xylose_isomerase	PRINTS	223	244
IPR001998	Xylose_isomerase	PRINTS	199	218
IPR001998	Xylose_isomerase	PRINTS	250	269
IPR001998	Xylose_isomerase	PRINTS	135	157
IPR001998	Xylose_isomerase	PRINTS	176	196
IPR001998	Xylose_isomerase	PRINTS	272	296
IPR001998	Xylose_isomerase	ProSiteProfiles	78	320
IPR001998	Xylose_isomerase	PRINTS	223	244
IPR001998	Xylose_isomerase	PRINTS	199	218
IPR001998	Xylose_isomerase	PRINTS	250	269
IPR001998	Xylose_isomerase	PRINTS	135	157
IPR001998	Xylose_isomerase	PRINTS	176	196
IPR001998	Xylose_isomerase	PRINTS	272	296
IPR036237	Xyl_isomerase-like_sf	SUPERFAMILY	82	336
IPR011990	TPR-like_helical_dom_sf	Gene3D	5	84
IPR001998	Xylose_isomerase	ProSiteProfiles	78	320

No CAZYmes available for this sequence

External Links

No external refs found!