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  5. Zm00001d010324_T001

Zm00001d010324_T001


Description : phosphate deficiency response 2


Gene families : OG_01_0004935 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004935_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d010324_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d010324_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_235


Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISM GOs from InterProScan
MF GO:0005215 transporter activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006812 monoatomic cation transport ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008250 ATPase_P-typ_transduc_dom_A_sf SUPERFAMILY 267 397
IPR023299 ATPase_P-typ_cyto_dom_N SUPERFAMILY 504 688
IPR023299 ATPase_P-typ_cyto_dom_N Gene3D 494 678
IPR006544 P-type_TPase_V PANTHER 9 1168
IPR023214 HAD_sf Gene3D 679 852
IPR018303 ATPase_P-typ_P_site ProSitePatterns 500 506
IPR036412 HAD-like_sf SUPERFAMILY 493 845
IPR044492 P_typ_ATPase_HD_dom SFLD 479 947
IPR001757 P_typ_ATPase NCBIfam 407 522
IPR006544 P-type_TPase_V NCBIfam 44 1141
IPR047820 P5A-type_ATPase CDD 182 1099
IPR023298 ATPase_P-typ_TM_dom_sf SUPERFAMILY 168 1161
IPR006544 P-type_TPase_V TIGRFAM 44 1141
IPR018303 ATPase_P-typ_P_site ProSitePatterns 500 506
IPR023299 ATPase_P-typ_cyto_dom_N SUPERFAMILY 504 688
IPR036412 HAD-like_sf SUPERFAMILY 493 845
IPR023299 ATPase_P-typ_cyto_dom_N Gene3D 494 678
IPR044492 P_typ_ATPase_HD_dom SFLD 479 947
IPR023214 HAD_sf Gene3D 679 852
IPR008250 ATPase_P-typ_transduc_dom_A_sf SUPERFAMILY 267 397
IPR023298 ATPase_P-typ_TM_dom_sf SUPERFAMILY 168 1161
IPR001757 P_typ_ATPase TIGRFAM 407 522

No CAZYmes available for this sequence

No external refs found!