Zm00001d010821_T002

Description : starch synthase 4

Gene families : OG_01_0005770 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005770_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d010821_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d010821_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_176
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_167

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004373	glycogen (starch) synthase activity	ISM	GOs from InterProScan
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISM	GOs from InterProScan
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011835	GS/SS	NCBIfam	417	900
IPR011835	GS/SS	Hamap	416	901
IPR001296	Glyco_trans_1	Pfam	712	864
IPR013534	Starch_synth_cat_dom	Pfam	417	655
IPR001296	Glyco_trans_1	Pfam	712	863
IPR011835	GS/SS	Hamap	416	901
IPR013534	Starch_synth_cat_dom	Pfam	417	655
IPR011835	GS/SS	TIGRFAM	417	900

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GT5	472	910	3.6e-168	417	900

External Links

No external refs found!