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Description : transducin family protein / WD-40 repeat family protein
Gene families : OG_01_0003606 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003606_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d010892_T013 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d010892_T013 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_223 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_219 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001680 | WD40_rpt | Pfam | 393 | 435 |
| IPR001680 | WD40_rpt | Pfam | 319 | 354 |
| IPR001680 | WD40_rpt | Pfam | 274 | 309 |
| IPR001680 | WD40_rpt | Pfam | 440 | 476 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 139 | 477 |
| IPR001680 | WD40_rpt | SMART | 174 | 209 |
| IPR001680 | WD40_rpt | SMART | 126 | 164 |
| IPR001680 | WD40_rpt | SMART | 269 | 309 |
| IPR001680 | WD40_rpt | SMART | 438 | 477 |
| IPR001680 | WD40_rpt | SMART | 390 | 435 |
| IPR001680 | WD40_rpt | SMART | 315 | 354 |
| IPR001680 | WD40_rpt | SMART | 214 | 266 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 121 | 228 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 229 | 383 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 387 | 486 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 276 | 309 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 322 | 363 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 387 | 486 |
| IPR001680 | WD40_rpt | SMART | 174 | 209 |
| IPR001680 | WD40_rpt | SMART | 269 | 309 |
| IPR001680 | WD40_rpt | SMART | 126 | 164 |
| IPR001680 | WD40_rpt | SMART | 438 | 477 |
| IPR001680 | WD40_rpt | SMART | 390 | 435 |
| IPR001680 | WD40_rpt | SMART | 315 | 354 |
| IPR001680 | WD40_rpt | SMART | 214 | 266 |
| IPR001680 | WD40_rpt | Pfam | 442 | 473 |
| IPR001680 | WD40_rpt | Pfam | 320 | 354 |
| IPR001680 | WD40_rpt | Pfam | 276 | 309 |
| IPR001680 | WD40_rpt | Pfam | 392 | 435 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 322 | 363 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 139 | 477 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 121 | 228 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 229 | 383 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 276 | 309 |
No CAZYmes available for this sequence
| No external refs found! |