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  5. Zm00001d010954_T001

Zm00001d010954_T001


Description : Cation efflux family protein


Gene families : OG_01_0003690 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003690_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d010954_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d010954_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_203
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_43


Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport ISM GOs from InterProScan
MF GO:0008324 monoatomic cation transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR027469 Cation_efflux_TMD_sf Gene3D 39 319
IPR002524 Cation_efflux Pfam 43 320
IPR027469 Cation_efflux_TMD_sf SUPERFAMILY 37 321
IPR002524 Cation_efflux NCBIfam 40 398
IPR036837 Cation_efflux_CTD_sf SUPERFAMILY 327 397
IPR027469 Cation_efflux_TMD_sf Gene3D 39 319
IPR002524 Cation_efflux TIGRFAM 40 398
IPR027469 Cation_efflux_TMD_sf SUPERFAMILY 37 321
IPR002524 Cation_efflux Pfam 43 320
IPR036837 Cation_efflux_CTD_sf SUPERFAMILY 327 397

No CAZYmes available for this sequence

No external refs found!