Zm00001d011011_T001

Description : histone H2A 11

Gene families : OG_01_0005476 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005476_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d011011_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d011011_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_121
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_14

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0046982	protein heterodimerization activity	ISM	GOs from InterProScan
MF	GO:0046983	protein dimerization activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003891	Initiation_fac_eIF4g_MI	ProSiteProfiles	42	167
IPR002119	Histone_H2A	CDD	210	304
IPR016024	ARM-type_fold	SUPERFAMILY	88	166
IPR002119	Histone_H2A	PRINTS	244	257
IPR002119	Histone_H2A	PRINTS	285	303
IPR002119	Histone_H2A	PRINTS	229	244
IPR002119	Histone_H2A	PRINTS	199	221
IPR002119	Histone_H2A	PRINTS	258	272
IPR002119	Histone_H2A	PANTHER	202	305
IPR003891	Initiation_fac_eIF4g_MI	Pfam	90	157
IPR007125	Histone_H2A/H2B/H3	Pfam	194	276
IPR032454	Histone_H2A_C	Pfam	278	307
IPR009072	Histone-fold	Gene3D	206	308
IPR002119	Histone_H2A	SMART	183	308
IPR009072	Histone-fold	SUPERFAMILY	209	285
IPR007125	Histone_H2A/H2B/H3	Pfam	194	276
IPR003891	Initiation_fac_eIF4g_MI	ProSiteProfiles	42	167
IPR045208	IF4G	PANTHER	87	202
IPR003891	Initiation_fac_eIF4g_MI	Pfam	90	157
IPR002119	Histone_H2A	PRINTS	244	257
IPR002119	Histone_H2A	PRINTS	285	303
IPR002119	Histone_H2A	PRINTS	229	244
IPR002119	Histone_H2A	PRINTS	199	221
IPR002119	Histone_H2A	PRINTS	258	272
IPR032454	Histone_H2A_C	Pfam	278	307
IPR002119	Histone_H2A	CDD	210	304
IPR009072	Histone-fold	SUPERFAMILY	209	285
IPR016024	ARM-type_fold	SUPERFAMILY	88	166
IPR009072	Histone-fold	Gene3D	206	308
IPR002119	Histone_H2A	SMART	183	308

No CAZYmes available for this sequence

External Links

No external refs found!