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  5. Zm00001d011036_T001

Zm00001d011036_T001


Description : RmlC-like cupins superfamily protein


Gene families : OG_01_0003540 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003540_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d011036_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d011036_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_237
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_121


Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014710 RmlC-like_jellyroll Gene3D 9 179
IPR011051 RmlC_Cupin_sf SUPERFAMILY 6 347
IPR006045 Cupin_1 Pfam 9 155
IPR006045 Cupin_1 Pfam 198 341
IPR006045 Cupin_1 SMART 4 161
IPR006045 Cupin_1 SMART 198 342
IPR014710 RmlC-like_jellyroll Gene3D 198 360
IPR006044 11S_seedstore_pln PRINTS 319 336
IPR006044 11S_seedstore_pln PRINTS 214 234
IPR006044 11S_seedstore_pln PRINTS 297 315
IPR006044 11S_seedstore_pln PRINTS 261 277
IPR006044 11S_seedstore_pln PRINTS 279 294
IPR006045 Cupin_1 SMART 4 161
IPR006045 Cupin_1 SMART 198 342
IPR006045 Cupin_1 Pfam 9 155
IPR006045 Cupin_1 Pfam 199 341
IPR006044 11S_seedstore_pln PRINTS 319 336
IPR006044 11S_seedstore_pln PRINTS 214 234
IPR006044 11S_seedstore_pln PRINTS 297 315
IPR006044 11S_seedstore_pln PRINTS 261 277
IPR006044 11S_seedstore_pln PRINTS 279 294
IPR014710 RmlC-like_jellyroll Gene3D 198 360
IPR014710 RmlC-like_jellyroll Gene3D 9 179
IPR011051 RmlC_Cupin_sf SUPERFAMILY 6 347

No CAZYmes available for this sequence

No external refs found!