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Description : transducin family protein / WD-40 repeat family protein
Gene families : OG_01_0004523 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004523_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d011140_T004 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d011140_T004 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_24 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 2121 | 2392 |
| IPR001680 | WD40_rpt | Pfam | 2349 | 2380 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 76 | 782 |
| IPR001680 | WD40_rpt | SMART | 2341 | 2380 |
| IPR001680 | WD40_rpt | SMART | 210 | 259 |
| IPR001680 | WD40_rpt | SMART | 441 | 489 |
| IPR001680 | WD40_rpt | SMART | 670 | 720 |
| IPR001680 | WD40_rpt | SMART | 2112 | 2149 |
| IPR001680 | WD40_rpt | SMART | 2212 | 2252 |
| IPR001680 | WD40_rpt | SMART | 2257 | 2303 |
| IPR001680 | WD40_rpt | SMART | 736 | 779 |
| IPR001680 | WD40_rpt | SMART | 2392 | 2438 |
| IPR001680 | WD40_rpt | SMART | 70 | 108 |
| IPR001680 | WD40_rpt | SMART | 2166 | 2201 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 58 | 326 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 2126 | 2440 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 21 | 321 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 2348 | 2389 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 435 | 862 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 597 | 834 |
| IPR022033 | Rav1p_C | Pfam | 734 | 1362 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 58 | 326 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 2126 | 2440 |
| IPR022033 | Rav1p_C | Pfam | 731 | 1362 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 435 | 862 |
| IPR001680 | WD40_rpt | SMART | 441 | 489 |
| IPR001680 | WD40_rpt | SMART | 210 | 259 |
| IPR001680 | WD40_rpt | SMART | 2341 | 2380 |
| IPR001680 | WD40_rpt | SMART | 670 | 720 |
| IPR001680 | WD40_rpt | SMART | 2112 | 2149 |
| IPR001680 | WD40_rpt | SMART | 2212 | 2252 |
| IPR001680 | WD40_rpt | SMART | 2257 | 2303 |
| IPR001680 | WD40_rpt | SMART | 736 | 779 |
| IPR001680 | WD40_rpt | SMART | 2392 | 2438 |
| IPR001680 | WD40_rpt | SMART | 70 | 108 |
| IPR001680 | WD40_rpt | SMART | 2166 | 2201 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 2348 | 2389 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 597 | 834 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 2121 | 2392 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 76 | 782 |
| IPR001680 | WD40_rpt | Pfam | 2346 | 2380 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 21 | 321 |
No CAZYmes available for this sequence
| No external refs found! |