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  5. Zm00001d011177_T006

Zm00001d011177_T006


Description : Sec1/munc18-like (SM) proteins superfamily


Gene families : OG_01_0007343 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007343_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d011177_T006
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d011177_T006
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58


Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001619 Sec1-like Pfam 36 610
IPR043154 Sec-1-like_dom1 Gene3D 4 142
IPR027482 Sec1-like_dom2 Gene3D 143 257
IPR036045 Sec1-like_sf SUPERFAMILY 16 614
IPR001619 Sec1-like PANTHER 16 609
IPR043127 Sec-1-like_dom3a Gene3D 271 376
IPR043155 VPS33_dom3b Gene3D 379 463
IPR027482 Sec1-like_dom2 Gene3D 464 513
IPR027482 Sec1-like_dom2 Gene3D 514 620
IPR001619 Sec1-like Pfam 36 610
IPR043127 Sec-1-like_dom3a Gene3D 271 376
IPR001619 Sec1-like PANTHER 272 619
IPR001619 Sec1-like PANTHER 11 253
IPR043154 Sec-1-like_dom1 Gene3D 4 142
IPR043155 VPS33_dom3b Gene3D 379 463
IPR027482 Sec1-like_dom2 Gene3D 464 513
IPR027482 Sec1-like_dom2 Gene3D 514 620
IPR036045 Sec1-like_sf SUPERFAMILY 16 614
IPR027482 Sec1-like_dom2 Gene3D 143 257

No CAZYmes available for this sequence

No external refs found!