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  5. Zm00001d011718_T002

Zm00001d011718_T002


Description : zinc knuckle (CCHC-type) family protein


Gene families : OG_01_0008428 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008428_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d011718_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d011718_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_176
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_426


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001878 Znf_CCHC ProSiteProfiles 225 239
IPR001878 Znf_CCHC ProSiteProfiles 251 265
IPR036875 Znf_CCHC_sf SUPERFAMILY 222 269
IPR036875 Znf_CCHC_sf SUPERFAMILY 274 339
IPR001878 Znf_CCHC SMART 224 240
IPR001878 Znf_CCHC SMART 251 267
IPR001878 Znf_CCHC SMART 321 337
IPR001878 Znf_CCHC SMART 280 296
IPR001878 Znf_CCHC ProSiteProfiles 281 295
IPR036875 Znf_CCHC_sf SUPERFAMILY 222 269
IPR001878 Znf_CCHC ProSiteProfiles 251 265
IPR001878 Znf_CCHC SMART 224 240
IPR001878 Znf_CCHC SMART 251 267
IPR001878 Znf_CCHC SMART 321 337
IPR001878 Znf_CCHC SMART 280 296
IPR001878 Znf_CCHC ProSiteProfiles 225 239
IPR001878 Znf_CCHC ProSiteProfiles 281 295
IPR036875 Znf_CCHC_sf SUPERFAMILY 274 339

No CAZYmes available for this sequence

No external refs found!