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  5. Zm00001d011720_T001

Zm00001d011720_T001


Description : violaxanthin de-epoxidase-related


Gene families : OG_01_0008853 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008853_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d011720_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d011720_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_266
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_167


Type GO Term Name Evidence Source
BP GO:0010028 xanthophyll cycle ISM GOs from InterProScan
MF GO:0046422 violaxanthin de-epoxidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR044682 VDE PANTHER 66 528
IPR010788 VDE_dom Pfam 253 503
IPR012674 Calycin Gene3D 352 511
IPR012674 Calycin Gene3D 352 511
IPR010788 VDE_dom Pfam 253 503
IPR044682 VDE PANTHER 9 525

No CAZYmes available for this sequence

No external refs found!