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  5. Zm00001d011723_T002

Zm00001d011723_T002


Description : potassium channel in Arabidopsis thaliana 3


Gene families : OG_01_0028705 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0028705_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d011723_T002 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d011723_T002
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_380


Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity ISM GOs from InterProScan
MF GO:0005249 voltage-gated potassium channel activity ISM GOs from InterProScan
BP GO:0006811 monoatomic ion transport ISM GOs from InterProScan
BP GO:0006813 potassium ion transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000595 cNMP-bd_dom CDD 371 481
IPR021789 KHA_dom ProSiteProfiles 568 640
IPR021789 KHA_dom Pfam 568 638
IPR000595 cNMP-bd_dom Pfam 391 477
IPR000595 cNMP-bd_dom ProSiteProfiles 371 491
IPR014710 RmlC-like_jellyroll Gene3D 338 505
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 267 278
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 241 258
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 285 294
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 89 99
IPR018490 cNMP-bd_dom_sf SUPERFAMILY 299 490
IPR000595 cNMP-bd_dom SMART 371 489
IPR045319 KAT/AKT PANTHER 24 500
IPR005821 Ion_trans_dom Pfam 53 296
IPR045319 KAT/AKT PANTHER 26 639
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 267 278
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 241 258
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 285 294
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 89 99
IPR018490 cNMP-bd_dom_sf SUPERFAMILY 299 490
IPR021789 KHA_dom Pfam 568 638
IPR021789 KHA_dom ProSiteProfiles 568 640
IPR000595 cNMP-bd_dom Pfam 391 477
IPR000595 cNMP-bd_dom CDD 371 481
IPR014710 RmlC-like_jellyroll Gene3D 338 505
IPR000595 cNMP-bd_dom ProSiteProfiles 371 491
IPR005821 Ion_trans_dom Pfam 53 293
IPR000595 cNMP-bd_dom SMART 371 489

No CAZYmes available for this sequence

No external refs found!