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  5. Zm00001d011779_T005

Zm00001d011779_T005


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0005066 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005066_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d011779_T005
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d011779_T005
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_317
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_152


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 320 490
IPR001680 WD40_rpt ProSiteProfiles 263 304
IPR001680 WD40_rpt ProSiteProfiles 370 411
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 414 487
IPR001680 WD40_rpt ProSiteProfiles 453 490
IPR001680 WD40_rpt ProSiteProfiles 411 452
IPR001680 WD40_rpt SMART 446 485
IPR001680 WD40_rpt SMART 405 443
IPR001680 WD40_rpt SMART 256 295
IPR001680 WD40_rpt SMART 214 253
IPR001680 WD40_rpt SMART 363 402
IPR001680 WD40_rpt SMART 172 211
IPR001680 WD40_rpt SMART 317 360
IPR001680 WD40_rpt SMART 127 169
IPR019775 WD40_repeat_CS ProSitePatterns 389 403
IPR001680 WD40_rpt ProSiteProfiles 179 211
IPR020472 G-protein_beta_WD-40_rep PRINTS 430 444
IPR020472 G-protein_beta_WD-40_rep PRINTS 389 403
IPR020472 G-protein_beta_WD-40_rep PRINTS 282 296
IPR001680 WD40_rpt ProSiteProfiles 221 262
IPR001680 WD40_rpt Pfam 260 295
IPR001680 WD40_rpt Pfam 219 253
IPR001680 WD40_rpt Pfam 447 485
IPR001680 WD40_rpt Pfam 413 443
IPR001680 WD40_rpt Pfam 178 211
IPR001680 WD40_rpt Pfam 331 357
IPR001680 WD40_rpt Pfam 365 402
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 131 319
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 125 404
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 414 487
IPR001680 WD40_rpt SMART 446 485
IPR001680 WD40_rpt SMART 256 295
IPR001680 WD40_rpt SMART 405 443
IPR001680 WD40_rpt SMART 214 253
IPR001680 WD40_rpt SMART 363 402
IPR001680 WD40_rpt SMART 172 211
IPR001680 WD40_rpt SMART 317 360
IPR001680 WD40_rpt SMART 127 169
IPR020472 G-protein_beta_WD-40_rep PRINTS 430 444
IPR020472 G-protein_beta_WD-40_rep PRINTS 389 403
IPR020472 G-protein_beta_WD-40_rep PRINTS 282 296
IPR001680 WD40_rpt Pfam 220 253
IPR001680 WD40_rpt Pfam 260 295
IPR001680 WD40_rpt Pfam 178 211
IPR001680 WD40_rpt Pfam 413 443
IPR001680 WD40_rpt Pfam 447 485
IPR001680 WD40_rpt Pfam 364 402
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 131 319
IPR001680 WD40_rpt ProSiteProfiles 370 411
IPR001680 WD40_rpt ProSiteProfiles 263 304
IPR001680 WD40_rpt ProSiteProfiles 221 262
IPR001680 WD40_rpt ProSiteProfiles 453 490
IPR019775 WD40_repeat_CS ProSitePatterns 389 403
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 320 490
IPR001680 WD40_rpt ProSiteProfiles 411 452
IPR001680 WD40_rpt ProSiteProfiles 179 211
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 125 404

No CAZYmes available for this sequence

No external refs found!