Zm00001d011855_T002

Description : uridine 5\'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS)

Gene families : OG_01_0001842 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001842_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d011855_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d011855_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_170

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0004588	orotate phosphoribosyltransferase activity	ISM	GOs from InterProScan
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	ISM	GOs from InterProScan
MF	GO:0005096	GTPase activator activity	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006206	pyrimidine nucleobase metabolic process	None	Extended
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	ISM	GOs from InterProScan
BP	GO:0006220	pyrimidine nucleotide metabolic process	None	Extended
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	ISM	GOs from InterProScan
BP	GO:0006222	UMP biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008047	enzyme activator activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009112	nucleobase metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009123	nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009124	nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009129	pyrimidine nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009130	pyrimidine nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009161	ribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009173	pyrimidine ribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009174	pyrimidine ribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	None	Extended
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016763	pentosyltransferase activity	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044205	'de novo' UMP biosynthetic process	ISM	GOs from InterProScan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046049	UMP metabolic process	None	Extended
BP	GO:0046112	nucleobase biosynthetic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000008	C2_dom	SMART	408	503
IPR014732	OMPdecase	NCBIfam	839	1039
IPR029057	PRTase-like	Gene3D	577	782
IPR000836	PRibTrfase_dom	CDD	642	747
IPR011060	RibuloseP-bd_barrel	SUPERFAMILY	777	1047
IPR000008	C2_dom	Pfam	408	496
IPR001164	ArfGAP_dom	ProSiteProfiles	229	361
IPR001754	OMPdeCOase_dom	Pfam	839	1036
IPR013785	Aldolase_TIM	Gene3D	791	1050
IPR001164	ArfGAP_dom	PRINTS	284	305
IPR001164	ArfGAP_dom	PRINTS	260	277
IPR001164	ArfGAP_dom	PRINTS	241	260
IPR001164	ArfGAP_dom	SMART	229	355
IPR001164	ArfGAP_dom	Pfam	230	347
IPR035892	C2_domain_sf	Gene3D	406	560
IPR001754	OMPdeCOase_dom	SMART	837	1038
IPR029057	PRTase-like	SUPERFAMILY	580	770
IPR000008	C2_dom	ProSiteProfiles	390	504
IPR023031	OPRT	Hamap	544	801
IPR038508	ArfGAP_dom_sf	Gene3D	225	352
IPR035892	C2_domain_sf	SUPERFAMILY	404	498
IPR004467	Or_phspho_trans_dom	NCBIfam	590	750
IPR018089	OMPdecase_AS	ProSitePatterns	876	889
IPR037278	ARFGAP/RecO	SUPERFAMILY	229	349
IPR023031	OPRT	Hamap	544	801
IPR001754	OMPdeCOase_dom	SMART	837	1038
IPR000836	PRibTrfase_dom	CDD	642	747
IPR035892	C2_domain_sf	Gene3D	406	560
IPR029057	PRTase-like	SUPERFAMILY	580	770
IPR029057	PRTase-like	Gene3D	577	782
IPR000008	C2_dom	ProSiteProfiles	390	504
IPR000008	C2_dom	Pfam	408	498
IPR014732	OMPdecase	TIGRFAM	839	1039
IPR001164	ArfGAP_dom	PRINTS	284	305
IPR001164	ArfGAP_dom	PRINTS	260	277
IPR001164	ArfGAP_dom	PRINTS	241	260
IPR001754	OMPdeCOase_dom	Pfam	839	1037
IPR018089	OMPdecase_AS	ProSitePatterns	876	889
IPR001164	ArfGAP_dom	ProSiteProfiles	229	361
IPR001164	ArfGAP_dom	Pfam	231	347
IPR000008	C2_dom	SMART	408	503
IPR011060	RibuloseP-bd_barrel	SUPERFAMILY	777	1047
IPR038508	ArfGAP_dom_sf	Gene3D	225	352
IPR001164	ArfGAP_dom	SMART	229	355
IPR013785	Aldolase_TIM	Gene3D	791	1050
IPR037278	ARFGAP/RecO	SUPERFAMILY	229	349
IPR035892	C2_domain_sf	SUPERFAMILY	404	498
IPR004467	Or_phspho_trans_dom	TIGRFAM	590	750

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d011855_T002

Expression Profile

Co-expression Networks

Functional Annotation