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  5. Zm00001d011966_T003

Zm00001d011966_T003


Description : ubiquitin-conjugating enzyme 27


Gene families : OG_01_0000067 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000067_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d011966_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d011966_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_166
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_96


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR009060 UBA-like_sf SUPERFAMILY 142 207
IPR015940 UBA SMART 169 206
IPR000608 UBQ-conjugat_E2 Pfam 6 139
IPR016135 UBQ-conjugating_enzyme/RWD SUPERFAMILY 5 140
IPR000608 UBQ-conjugat_E2 ProSiteProfiles 2 163
IPR023313 UBQ-conjugating_AS ProSitePatterns 77 93
IPR016135 UBQ-conjugating_enzyme/RWD Gene3D 2 166
IPR015940 UBA ProSiteProfiles 168 207
IPR041974 UBC27_UBA CDD 170 205
IPR000608 UBQ-conjugat_E2 CDD 4 158
IPR015940 UBA Pfam 170 204
IPR000608 UBQ-conjugat_E2 ProSiteProfiles 2 163
IPR016135 UBQ-conjugating_enzyme/RWD SUPERFAMILY 5 140
IPR015940 UBA ProSiteProfiles 168 207
IPR015940 UBA Pfam 170 203
IPR000608 UBQ-conjugat_E2 Pfam 6 139
IPR009060 UBA-like_sf SUPERFAMILY 142 207
IPR041974 UBC27_UBA CDD 170 205
IPR016135 UBQ-conjugating_enzyme/RWD Gene3D 2 166
IPR000608 UBQ-conjugat_E2 CDD 4 158
IPR015940 UBA SMART 169 206
IPR023313 UBQ-conjugating_AS ProSitePatterns 77 93

No CAZYmes available for this sequence

No external refs found!