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  5. Zm00001d012228_T003

Zm00001d012228_T003


Description : catalytic LigB subunit of aromatic ring-opening dioxygenase family


Gene families : OG_01_0007004 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007004_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d012228_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d012228_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_128
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_117


Type GO Term Name Evidence Source
BP GO:0006725 cellular aromatic compound metabolic process ISM GOs from InterProScan
MF GO:0008198 ferrous iron binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014436 Extradiol_dOase_DODA CDD 93 351
IPR004183 Xdiol_dOase_suB Pfam 93 351
IPR004183 Xdiol_dOase_suB Pfam 93 351
IPR014436 Extradiol_dOase_DODA CDD 93 351

No CAZYmes available for this sequence

No external refs found!