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  5. Zm00001d012275_T001

Zm00001d012275_T001


Description : SNARE-like superfamily protein


Gene families : OG_01_0001455 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001455_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d012275_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d012275_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_218
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_52


Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR010908 Longin_dom CDD 28 142
IPR042855 V_SNARE_CC ProSiteProfiles 150 210
IPR045848 R-SNARE_YKT6 CDD 148 208
IPR010908 Longin_dom Pfam 57 125
IPR042855 V_SNARE_CC Pfam 148 205
IPR010908 Longin_dom ProSiteProfiles 7 126
IPR011012 Longin-like_dom_sf SUPERFAMILY 28 150
IPR001388 Synaptobrevin-like ProSitePatterns 168 187
IPR010908 Longin_dom SMART 56 138
IPR010908 Longin_dom Pfam 57 122
IPR001388 Synaptobrevin-like ProSitePatterns 168 187
IPR010908 Longin_dom ProSiteProfiles 7 126
IPR045848 R-SNARE_YKT6 CDD 148 208
IPR010908 Longin_dom CDD 28 142
IPR042855 V_SNARE_CC Pfam 148 205
IPR011012 Longin-like_dom_sf SUPERFAMILY 28 150
IPR042855 V_SNARE_CC ProSiteProfiles 150 210
IPR010908 Longin_dom SMART 56 138

No CAZYmes available for this sequence

No external refs found!