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  5. Zm00001d012524_T001

Zm00001d012524_T001


Description : SKU5 similar 12


Gene families : OG_01_0002715 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002715_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d012524_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d012524_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_181


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008972 Cupredoxin Gene3D 353 549
IPR011706 Cu-oxidase_C Pfam 388 528
IPR008972 Cupredoxin SUPERFAMILY 163 344
IPR008972 Cupredoxin Gene3D 24 153
IPR008972 Cupredoxin SUPERFAMILY 354 546
IPR008972 Cupredoxin SUPERFAMILY 30 180
IPR008972 Cupredoxin Gene3D 165 343
IPR011707 Cu-oxidase-like_N Pfam 41 154
IPR045087 Cu-oxidase_fam PANTHER 34 521
IPR001117 Cu-oxidase_2nd Pfam 167 308
IPR008972 Cupredoxin Gene3D 165 343
IPR008972 Cupredoxin SUPERFAMILY 354 546
IPR045087 Cu-oxidase_fam PANTHER 8 550
IPR008972 Cupredoxin Gene3D 353 549
IPR001117 Cu-oxidase_2nd Pfam 167 307
IPR008972 Cupredoxin SUPERFAMILY 163 344
IPR011707 Cu-oxidase-like_N Pfam 41 154
IPR011706 Cu-oxidase_C Pfam 388 527
IPR008972 Cupredoxin Gene3D 24 153
IPR008972 Cupredoxin SUPERFAMILY 30 180
HMM Family HMM Length Query Length e-Value Query Start Query End
AA1 358 560 1e-70 51 510
No external refs found!