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  5. Zm00001d012606_T001

Zm00001d012606_T001


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0003071 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003071_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d012606_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d012606_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_127


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 296 330
IPR011990 TPR-like_helical_dom_sf Gene3D 244 400
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 226 260
IPR002885 Pentatricopeptide_rpt NCBIfam 264 296
IPR002885 Pentatricopeptide_rpt NCBIfam 298 331
IPR002885 Pentatricopeptide_rpt NCBIfam 228 262
IPR002885 Pentatricopeptide_rpt NCBIfam 193 227
IPR011990 TPR-like_helical_dom_sf Gene3D 118 243
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 191 225
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 261 295
IPR002885 Pentatricopeptide_rpt Pfam 194 223
IPR002885 Pentatricopeptide_rpt Pfam 225 273
IPR002885 Pentatricopeptide_rpt Pfam 295 339
IPR011990 TPR-like_helical_dom_sf Gene3D 118 243
IPR002885 Pentatricopeptide_rpt TIGRFAM 228 262
IPR002885 Pentatricopeptide_rpt TIGRFAM 298 331
IPR002885 Pentatricopeptide_rpt TIGRFAM 193 227
IPR002885 Pentatricopeptide_rpt TIGRFAM 264 296
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 226 260
IPR002885 Pentatricopeptide_rpt Pfam 194 223
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 296 330
IPR002885 Pentatricopeptide_rpt Pfam 225 273
IPR002885 Pentatricopeptide_rpt Pfam 295 339
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 261 295
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 191 225
IPR011990 TPR-like_helical_dom_sf Gene3D 244 400

No CAZYmes available for this sequence

No external refs found!