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Description : Mannose-binding lectin superfamily protein
Gene families : OG_01_0001937 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001937_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d012640_T010 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d012640_T010 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_185 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_5 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0030246 | carbohydrate binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001229 | Jacalin-like_lectin_dom | SMART | 513 | 648 |
| IPR001229 | Jacalin-like_lectin_dom | SMART | 316 | 456 |
| IPR024964 | CTLH/CRA | Pfam | 128 | 268 |
| IPR006595 | CTLH_C | ProSiteProfiles | 126 | 183 |
| IPR006595 | CTLH_C | SMART | 126 | 183 |
| IPR033734 | Jacalin-like_lectin_dom_plant | CDD | 516 | 647 |
| IPR001229 | Jacalin-like_lectin_dom | ProSiteProfiles | 305 | 456 |
| IPR006594 | LisH | SMART | 87 | 119 |
| IPR036404 | Jacalin-like_lectin_dom_sf | Gene3D | 293 | 454 |
| IPR036404 | Jacalin-like_lectin_dom_sf | Gene3D | 490 | 647 |
| IPR001229 | Jacalin-like_lectin_dom | Pfam | 316 | 454 |
| IPR001229 | Jacalin-like_lectin_dom | Pfam | 513 | 647 |
| IPR001229 | Jacalin-like_lectin_dom | ProSiteProfiles | 502 | 648 |
| IPR033734 | Jacalin-like_lectin_dom_plant | CDD | 316 | 454 |
| IPR006594 | LisH | ProSiteProfiles | 87 | 119 |
| IPR036404 | Jacalin-like_lectin_dom_sf | SUPERFAMILY | 302 | 454 |
| IPR036404 | Jacalin-like_lectin_dom_sf | SUPERFAMILY | 500 | 647 |
| IPR013144 | CRA_dom | SMART | 179 | 274 |
| IPR033734 | Jacalin-like_lectin_dom_plant | CDD | 516 | 647 |
| IPR001229 | Jacalin-like_lectin_dom | SMART | 513 | 648 |
| IPR001229 | Jacalin-like_lectin_dom | SMART | 316 | 456 |
| IPR001229 | Jacalin-like_lectin_dom | ProSiteProfiles | 502 | 648 |
| IPR006594 | LisH | ProSiteProfiles | 87 | 119 |
| IPR024964 | CTLH/CRA | Pfam | 128 | 266 |
| IPR006595 | CTLH_C | ProSiteProfiles | 126 | 183 |
| IPR013144 | CRA_dom | SMART | 179 | 274 |
| IPR033734 | Jacalin-like_lectin_dom_plant | CDD | 316 | 454 |
| IPR006594 | LisH | SMART | 87 | 119 |
| IPR001229 | Jacalin-like_lectin_dom | Pfam | 316 | 454 |
| IPR001229 | Jacalin-like_lectin_dom | Pfam | 513 | 647 |
| IPR001229 | Jacalin-like_lectin_dom | ProSiteProfiles | 305 | 456 |
| IPR006595 | CTLH_C | SMART | 126 | 183 |
| IPR036404 | Jacalin-like_lectin_dom_sf | SUPERFAMILY | 500 | 647 |
| IPR036404 | Jacalin-like_lectin_dom_sf | Gene3D | 293 | 454 |
| IPR036404 | Jacalin-like_lectin_dom_sf | Gene3D | 490 | 647 |
| IPR036404 | Jacalin-like_lectin_dom_sf | SUPERFAMILY | 302 | 454 |
No CAZYmes available for this sequence
| No external refs found! |