Zm00001d012943_T001

Description : golgin candidate 6

Gene families : OG_01_0002612 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002612_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d012943_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d012943_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_88
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002110	Ankyrin_rpt	ProSiteProfiles	285	317
IPR002110	Ankyrin_rpt	ProSiteProfiles	318	350
IPR002110	Ankyrin_rpt	Pfam	288	339
IPR002110	Ankyrin_rpt	SMART	318	347
IPR002110	Ankyrin_rpt	SMART	285	314
IPR029045	ClpP/crotonase-like_dom_sf	SUPERFAMILY	55	119
IPR006955	Uso1_p115_C	Pfam	407	531
IPR036770	Ankyrin_rpt-contain_sf	Gene3D	274	366
IPR025151	ELYS_dom	Pfam	115	263
IPR001753	Enoyl-CoA_hydra/iso	Pfam	56	129
IPR036770	Ankyrin_rpt-contain_sf	SUPERFAMILY	286	351
IPR044718	HOS1	PANTHER	115	485
IPR006955	Uso1_p115_C	Pfam	407	534
IPR036770	Ankyrin_rpt-contain_sf	Gene3D	274	366
IPR002110	Ankyrin_rpt	SMART	318	347
IPR002110	Ankyrin_rpt	SMART	285	314
IPR002110	Ankyrin_rpt	Pfam	289	339
IPR002110	Ankyrin_rpt	ProSiteProfiles	285	317
IPR036770	Ankyrin_rpt-contain_sf	SUPERFAMILY	286	351
IPR025151	ELYS_dom	Pfam	115	264
IPR029045	ClpP/crotonase-like_dom_sf	SUPERFAMILY	55	119
IPR002110	Ankyrin_rpt	ProSiteProfiles	318	350
IPR001753	Enoyl-CoA_hydra/iso	Pfam	56	129

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d012943_T001

Expression Profile

Co-expression Networks

Functional Annotation