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  5. Zm00001d012972_T001

Zm00001d012972_T001


Description : Chalcone-flavanone isomerase family protein


Gene families : OG_01_0007642 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007642_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d012972_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d012972_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_120


Type GO Term Name Evidence Source
BP GO:0009813 flavonoid biosynthetic process ISM GOs from InterProScan
MF GO:0016872 intramolecular lyase activity ISM GOs from InterProScan
MF GO:0045430 chalcone isomerase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016088 Chalcone_isomerase_3-sand Gene3D 8 189
IPR016089 Chalcone_isomerase_bundle_sf Gene3D 56 209
IPR036298 Chalcone_isomerase_sf SUPERFAMILY 4 213
IPR044164 CFI PANTHER 2 216
IPR016087 Chalcone_isomerase Pfam 8 210
IPR036298 Chalcone_isomerase_sf SUPERFAMILY 4 213
IPR016087 Chalcone_isomerase Pfam 8 210
IPR016088 Chalcone_isomerase_3-sand Gene3D 8 189
IPR016089 Chalcone_isomerase_bundle_sf Gene3D 56 209
IPR044164 CFI PANTHER 3 215

No CAZYmes available for this sequence

No external refs found!