Zm00001d013053_T003

Description : Oxoglutarate/iron-dependent oxygenase

Gene families : OG_01_0018272 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018272_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013053_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013053_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_41
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_82

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	ISM	GOs from InterProScan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030246	carbohydrate binding	None	Extended
MF	GO:0031406	carboxylic acid binding	None	Extended
MF	GO:0031418	L-ascorbic acid binding	ISM	GOs from InterProScan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043177	organic acid binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048029	monosaccharide binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005123	Oxoglu/Fe-dep_dioxygenase	ProSiteProfiles	179	301
IPR045054	P4HA-like	PANTHER	35	306
IPR003582	ShKT_dom	Pfam	315	356
IPR006620	Pro_4_hyd_alph	SMART	81	300
IPR003582	ShKT_dom	ProSiteProfiles	316	356
IPR044862	Pro_4_hyd_alph_FE2OG_OXY	Pfam	183	300
IPR003582	ShKT_dom	SMART	315	357
IPR045054	P4HA-like	PANTHER	3	358
IPR003582	ShKT_dom	SMART	315	357
IPR003582	ShKT_dom	ProSiteProfiles	316	356
IPR005123	Oxoglu/Fe-dep_dioxygenase	ProSiteProfiles	179	301
IPR003582	ShKT_dom	Pfam	315	356
IPR006620	Pro_4_hyd_alph	SMART	81	300
IPR044862	Pro_4_hyd_alph_FE2OG_OXY	Pfam	183	300

No CAZYmes available for this sequence

External Links

No external refs found!