Zm00001d013059_T003

Description : VPS35 homolog B

Gene families : OG_01_0011250 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011250_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013059_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013059_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_217
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	ISM	GOs from InterProScan
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0016482	cytosolic transport	None	Extended
CC	GO:0030906	retromer, cargo-selective complex	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042147	retrograde transport, endosome to Golgi	ISM	GOs from InterProScan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR042491	Vps35_C	Gene3D	476	807
IPR005378	Vps35	Pfam	22	779
IPR016024	ARM-type_fold	SUPERFAMILY	219	524
IPR005378	Vps35	PIRSF	13	823
IPR005378	Vps35	PANTHER	14	821
IPR005378	Vps35	PANTHER	15	577
IPR005378	Vps35	PANTHER	594	821
IPR005378	Vps35	PIRSF	13	823
IPR016024	ARM-type_fold	SUPERFAMILY	219	524
IPR042491	Vps35_C	Gene3D	476	807
IPR005378	Vps35	Pfam	22	779

No CAZYmes available for this sequence

External Links

No external refs found!