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  5. Zm00001d013094_T001

Zm00001d013094_T001


Description : BTB-POZ and MATH domain 4


Gene families : OG_01_0004082 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004082_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013094_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013094_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_4
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_375


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002083 MATH/TRAF_dom CDD 46 179
IPR000210 BTB/POZ_dom Pfam 208 333
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 194 334
IPR008974 TRAF-like Gene3D 44 183
IPR002083 MATH/TRAF_dom SMART 50 162
IPR011333 SKP1/BTB/POZ_sf Gene3D 195 334
IPR002083 MATH/TRAF_dom ProSiteProfiles 45 179
IPR000210 BTB/POZ_dom ProSiteProfiles 215 291
IPR000210 BTB/POZ_dom SMART 215 334
IPR034090 BPM_C CDD 331 392
IPR045005 BPM1-6 PANTHER 36 394
IPR000210 BTB/POZ_dom ProSiteProfiles 215 291
IPR002083 MATH/TRAF_dom ProSiteProfiles 45 179
IPR008974 TRAF-like Gene3D 44 183
IPR002083 MATH/TRAF_dom SMART 50 162
IPR002083 MATH/TRAF_dom CDD 46 179
IPR000210 BTB/POZ_dom Pfam 207 333
IPR011333 SKP1/BTB/POZ_sf Gene3D 195 334
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 194 334
IPR045005 BPM1-6 PANTHER 23 406
IPR034090 BPM_C CDD 331 392
IPR000210 BTB/POZ_dom SMART 215 334

No CAZYmes available for this sequence

No external refs found!