Zm00001d013116_T002

Description : cullin4

Gene families : OG_01_0010451 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010451_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013116_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013116_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_157
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_162

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
CC	GO:0031461	cullin-RING ubiquitin ligase complex	ISM	GOs from InterProScan
MF	GO:0031625	ubiquitin protein ligase binding	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036390	WH_DNA-bd_sf	SUPERFAMILY	772	860
IPR019559	Cullin_neddylation_domain	Pfam	792	852
IPR016159	Cullin_repeat-like_dom_sf	SUPERFAMILY	143	485
IPR016158	Cullin_homology	SMART	519	683
IPR016158	Cullin_homology	ProSiteProfiles	489	733
IPR045093	Cullin	PANTHER	140	852
IPR001373	Cullin_N	Pfam	149	761
IPR019559	Cullin_neddylation_domain	SMART	789	854
IPR016157	Cullin_CS	ProSitePatterns	833	860
IPR036317	Cullin_homology_sf	SUPERFAMILY	486	771
IPR036388	WH-like_DNA-bd_sf	Gene3D	787	860
IPR036317	Cullin_homology_sf	SUPERFAMILY	486	771
IPR016158	Cullin_homology	ProSiteProfiles	489	733
IPR016158	Cullin_homology	SMART	519	683
IPR045093	Cullin	PANTHER	134	860
IPR036390	WH_DNA-bd_sf	SUPERFAMILY	772	860
IPR016159	Cullin_repeat-like_dom_sf	SUPERFAMILY	143	485
IPR019559	Cullin_neddylation_domain	Pfam	792	852
IPR016157	Cullin_CS	ProSitePatterns	833	860
IPR001373	Cullin_N	Pfam	149	761
IPR036388	WH-like_DNA-bd_sf	Gene3D	787	860
IPR019559	Cullin_neddylation_domain	SMART	789	854

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d013116_T002

Expression Profile

Co-expression Networks

Functional Annotation