Zm00001d013159_T001

Description : Tubulin/FtsZ family protein

Gene families : OG_01_0000030 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000030_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013159_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013159_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_114

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005200	structural constituent of cytoskeleton	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005874	microtubule	ISM	GOs from InterProScan
BP	GO:0007017	microtubule-based process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099081	supramolecular polymer	None	Extended
CC	GO:0099512	supramolecular fiber	None	Extended
CC	GO:0099513	polymeric cytoskeletal fiber	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003008	Tubulin_FtsZ_GTPase	Pfam	3	213
IPR037103	Tubulin/FtsZ-like_C	Gene3D	269	383
IPR023123	Tubulin_C	Gene3D	384	436
IPR000217	Tubulin	PRINTS	108	132
IPR000217	Tubulin	PRINTS	380	408
IPR000217	Tubulin	PRINTS	134	152
IPR000217	Tubulin	PRINTS	53	72
IPR000217	Tubulin	PRINTS	10	30
IPR000217	Tubulin	PRINTS	95	106
IPR000217	Tubulin	PRINTS	178	191
IPR000217	Tubulin	PRINTS	153	174
IPR000217	Tubulin	PRINTS	192	212
IPR000217	Tubulin	PANTHER	1	438
IPR003008	Tubulin_FtsZ_GTPase	SMART	49	246
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	SMART	248	393
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	Pfam	263	392
IPR008280	Tub_FtsZ_C	SUPERFAMILY	246	435
IPR002452	Alpha_tubulin	PRINTS	88	101
IPR002452	Alpha_tubulin	PRINTS	214	226
IPR002452	Alpha_tubulin	PRINTS	148	160
IPR002452	Alpha_tubulin	PRINTS	161	172
IPR002452	Alpha_tubulin	PRINTS	385	401
IPR002452	Alpha_tubulin	PRINTS	45	58
IPR002452	Alpha_tubulin	PRINTS	422	438
IPR002452	Alpha_tubulin	PRINTS	347	360
IPR002452	Alpha_tubulin	PRINTS	18	33
IPR002452	Alpha_tubulin	PRINTS	120	128
IPR002452	Alpha_tubulin	PRINTS	321	342
IPR002452	Alpha_tubulin	PRINTS	274	289
IPR002452	Alpha_tubulin	PRINTS	360	379
IPR036525	Tubulin/FtsZ_GTPase_sf	Gene3D	1	268
IPR017975	Tubulin_CS	ProSitePatterns	142	148
IPR036525	Tubulin/FtsZ_GTPase_sf	SUPERFAMILY	1	244
IPR017975	Tubulin_CS	ProSitePatterns	142	148
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	Pfam	263	392
IPR037103	Tubulin/FtsZ-like_C	Gene3D	269	383
IPR002452	Alpha_tubulin	PRINTS	88	101
IPR002452	Alpha_tubulin	PRINTS	214	226
IPR002452	Alpha_tubulin	PRINTS	148	160
IPR002452	Alpha_tubulin	PRINTS	161	172
IPR002452	Alpha_tubulin	PRINTS	385	401
IPR002452	Alpha_tubulin	PRINTS	45	58
IPR002452	Alpha_tubulin	PRINTS	422	438
IPR002452	Alpha_tubulin	PRINTS	347	360
IPR002452	Alpha_tubulin	PRINTS	18	33
IPR002452	Alpha_tubulin	PRINTS	120	128
IPR002452	Alpha_tubulin	PRINTS	321	342
IPR002452	Alpha_tubulin	PRINTS	274	289
IPR002452	Alpha_tubulin	PRINTS	360	379
IPR003008	Tubulin_FtsZ_GTPase	SMART	49	246
IPR003008	Tubulin_FtsZ_GTPase	Pfam	3	213
IPR023123	Tubulin_C	Gene3D	384	436
IPR008280	Tub_FtsZ_C	SUPERFAMILY	246	435
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	SMART	248	393
IPR000217	Tubulin	PANTHER	1	444
IPR000217	Tubulin	PRINTS	108	132
IPR000217	Tubulin	PRINTS	380	408
IPR000217	Tubulin	PRINTS	134	152
IPR000217	Tubulin	PRINTS	53	72
IPR000217	Tubulin	PRINTS	10	30
IPR000217	Tubulin	PRINTS	95	106
IPR000217	Tubulin	PRINTS	178	191
IPR000217	Tubulin	PRINTS	153	174
IPR000217	Tubulin	PRINTS	192	212
IPR036525	Tubulin/FtsZ_GTPase_sf	Gene3D	1	268
IPR036525	Tubulin/FtsZ_GTPase_sf	SUPERFAMILY	1	244

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d013159_T001

Expression Profile

Co-expression Networks

Functional Annotation