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Description : BED zinc finger ;hAT family dimerisation domain
Gene families : OG_01_0000515 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000515_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013336_T002 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013336_T002 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_133 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_272 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | ISM | GOs from InterProScan |
| MF | GO:0046983 | protein dimerization activity | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036236 | Znf_C2H2_sf | SUPERFAMILY | 66 | 113 |
| IPR008906 | HATC_C_dom | Pfam | 1270 | 1355 |
| IPR012337 | RNaseH-like_sf | SUPERFAMILY | 225 | 602 |
| IPR045259 | DAYSLEEPER-like | PANTHER | 844 | 1358 |
| IPR036236 | Znf_C2H2_sf | SUPERFAMILY | 723 | 769 |
| IPR003656 | Znf_BED | ProSiteProfiles | 63 | 123 |
| IPR012337 | RNaseH-like_sf | SUPERFAMILY | 881 | 1356 |
| IPR025525 | hAT-like_transposase_RNase-H | Pfam | 461 | 557 |
| IPR025525 | hAT-like_transposase_RNase-H | Pfam | 1119 | 1216 |
| IPR003656 | Znf_BED | ProSiteProfiles | 720 | 780 |
| IPR008906 | HATC_C_dom | Pfam | 1270 | 1355 |
| IPR045259 | DAYSLEEPER-like | PANTHER | 716 | 1360 |
| IPR003656 | Znf_BED | ProSiteProfiles | 63 | 123 |
| IPR036236 | Znf_C2H2_sf | SUPERFAMILY | 723 | 769 |
| IPR012337 | RNaseH-like_sf | SUPERFAMILY | 881 | 1356 |
| IPR003656 | Znf_BED | ProSiteProfiles | 720 | 780 |
| IPR036236 | Znf_C2H2_sf | SUPERFAMILY | 66 | 113 |
| IPR025525 | hAT-like_transposase_RNase-H | Pfam | 461 | 557 |
| IPR025525 | hAT-like_transposase_RNase-H | Pfam | 1119 | 1216 |
| IPR012337 | RNaseH-like_sf | SUPERFAMILY | 225 | 602 |
| IPR045259 | DAYSLEEPER-like | PANTHER | 58 | 588 |
No CAZYmes available for this sequence
| No external refs found! |