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Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG_01_0019917 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0019917_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013495_T002 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013495_T002 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_262 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_127 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 419 | 433 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 132 | 146 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 175 | 189 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 367 | 397 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 155 | 190 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 48 | 198 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 366 | 539 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 399 | 441 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 73 | 444 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 260 | 274 |
| IPR001680 | WD40_rpt | Pfam | 315 | 342 |
| IPR001680 | WD40_rpt | Pfam | 398 | 432 |
| IPR001680 | WD40_rpt | Pfam | 150 | 188 |
| IPR001680 | WD40_rpt | Pfam | 244 | 273 |
| IPR001680 | WD40_rpt | Pfam | 113 | 145 |
| IPR001680 | WD40_rpt | Pfam | 364 | 387 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 233 | 365 |
| IPR001680 | WD40_rpt | SMART | 106 | 145 |
| IPR001680 | WD40_rpt | SMART | 148 | 188 |
| IPR001680 | WD40_rpt | SMART | 392 | 432 |
| IPR001680 | WD40_rpt | SMART | 233 | 273 |
| IPR001680 | WD40_rpt | SMART | 302 | 342 |
| IPR001680 | WD40_rpt | SMART | 48 | 90 |
| IPR001680 | WD40_rpt | SMART | 347 | 388 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 113 | 154 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 399 | 441 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 260 | 274 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 113 | 154 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 73 | 444 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 155 | 190 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 366 | 539 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 48 | 198 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 233 | 365 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 367 | 397 |
| IPR001680 | WD40_rpt | SMART | 106 | 145 |
| IPR001680 | WD40_rpt | SMART | 148 | 188 |
| IPR001680 | WD40_rpt | SMART | 392 | 432 |
| IPR001680 | WD40_rpt | SMART | 233 | 273 |
| IPR001680 | WD40_rpt | SMART | 302 | 342 |
| IPR001680 | WD40_rpt | SMART | 48 | 90 |
| IPR001680 | WD40_rpt | SMART | 347 | 388 |
| IPR001680 | WD40_rpt | Pfam | 149 | 188 |
| IPR001680 | WD40_rpt | Pfam | 114 | 145 |
| IPR001680 | WD40_rpt | Pfam | 315 | 341 |
| IPR001680 | WD40_rpt | Pfam | 398 | 432 |
| IPR001680 | WD40_rpt | Pfam | 245 | 273 |
| IPR001680 | WD40_rpt | Pfam | 350 | 387 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 419 | 433 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 132 | 146 |
| IPR020472 | G-protein_beta_WD-40_rep | PRINTS | 175 | 189 |
No CAZYmes available for this sequence
| No external refs found! |