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Description : CCCH-type zinc finger protein with ARM repeat domain
Gene families : OG_01_0013260 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013260_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013497_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013497_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_218 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_201 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR045234 | Unkempt-like | PANTHER | 85 | 683 |
| IPR000571 | Znf_CCCH | SMART | 303 | 329 |
| IPR000571 | Znf_CCCH | SMART | 338 | 361 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 47 | 174 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 125 | 160 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 90 | 168 |
| IPR002110 | Ankyrin_rpt | Pfam | 90 | 159 |
| IPR002110 | Ankyrin_rpt | SMART | 125 | 157 |
| IPR002110 | Ankyrin_rpt | SMART | 90 | 120 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 308 | 330 |
| IPR000571 | Znf_CCCH | Pfam | 307 | 328 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 47 | 174 |
| IPR045234 | Unkempt-like | PANTHER | 31 | 741 |
| IPR000571 | Znf_CCCH | ProSiteProfiles | 308 | 330 |
| IPR002110 | Ankyrin_rpt | SMART | 125 | 157 |
| IPR002110 | Ankyrin_rpt | SMART | 90 | 120 |
| IPR002110 | Ankyrin_rpt | Pfam | 90 | 159 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 125 | 160 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 90 | 168 |
| IPR000571 | Znf_CCCH | Pfam | 308 | 328 |
| IPR000571 | Znf_CCCH | SMART | 303 | 329 |
| IPR000571 | Znf_CCCH | SMART | 338 | 361 |
No CAZYmes available for this sequence
| No external refs found! |