Zm00001d013568_T001

Description : cold, circadian rhythm, and RNA binding 1

Gene families : OG_01_0001066 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001066_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013568_T001	No neighbors in network
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013568_T001
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_96

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR035979	RBD_domain_sf	SUPERFAMILY	8	96
IPR000504	RRM_dom	SMART	9	82
IPR048289	RRM2_NsCP33-like	CDD	9	84
IPR000504	RRM_dom	Pfam	11	80
IPR000504	RRM_dom	ProSiteProfiles	8	86
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	2	107
IPR035979	RBD_domain_sf	SUPERFAMILY	8	96
IPR000504	RRM_dom	SMART	9	82
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	2	107
IPR000504	RRM_dom	ProSiteProfiles	8	86
IPR000504	RRM_dom	Pfam	11	79

No CAZYmes available for this sequence

External Links

No external refs found!