Zm00001d013631_T001

Description : TATA binding protein 2

Gene families : OG_01_0000837 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000837_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013631_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013631_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_317
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_243

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000814	TBP	Pfam	173	251
IPR000814	TBP	Pfam	259	342
IPR033710	TBP_eukaryotic	CDD	174	342
IPR000814	TBP	Hamap	166	345
IPR030491	TBP_CS	ProSitePatterns	290	339
IPR012295	TBP_dom_sf	Gene3D	174	342
IPR000814	TBP	PRINTS	286	301
IPR000814	TBP	PRINTS	196	215
IPR000814	TBP	PRINTS	262	278
IPR000814	TBP	PRINTS	215	233
IPR000814	TBP	PRINTS	172	187
IPR000814	TBP	PRINTS	305	321
IPR012295	TBP_dom_sf	Gene3D	177	262
IPR000814	TBP	PANTHER	18	347
IPR000814	TBP	Pfam	259	342
IPR000814	TBP	Pfam	173	251
IPR033710	TBP_eukaryotic	CDD	174	342
IPR000814	TBP	PANTHER	1	28
IPR012295	TBP_dom_sf	Gene3D	177	262
IPR000814	TBP	Hamap	166	345
IPR000814	TBP	PANTHER	173	347
IPR012295	TBP_dom_sf	Gene3D	174	342
IPR000814	TBP	PRINTS	286	301
IPR000814	TBP	PRINTS	196	215
IPR000814	TBP	PRINTS	262	278
IPR000814	TBP	PRINTS	215	233
IPR000814	TBP	PRINTS	172	187
IPR000814	TBP	PRINTS	305	321
IPR030491	TBP_CS	ProSitePatterns	290	339

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d013631_T001

Expression Profile

Co-expression Networks

Functional Annotation