Zm00001d013636_T001

Description : gamma-tubulin

Gene families : OG_01_0002143 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002143_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d013636_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d013636_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
CC	GO:0000930	gamma-tubulin complex	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005874	microtubule	ISM	GOs from InterProScan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	ISM	GOs from InterProScan
BP	GO:0007020	microtubule nucleation	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0031122	cytoplasmic microtubule organization	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099081	supramolecular polymer	None	Extended
CC	GO:0099512	supramolecular fiber	None	Extended
CC	GO:0099513	polymeric cytoskeletal fiber	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR023123	Tubulin_C	Gene3D	219	261
IPR000217	Tubulin	PANTHER	22	246
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	Pfam	107	179
IPR036525	Tubulin/FtsZ_GTPase_sf	Gene3D	14	112
IPR000217	Tubulin	PRINTS	217	245
IPR000217	Tubulin	PRINTS	36	56
IPR000217	Tubulin	PRINTS	22	35
IPR037103	Tubulin/FtsZ-like_C	Gene3D	113	218
IPR002454	Gamma_tubulin	PRINTS	94	105
IPR002454	Gamma_tubulin	PRINTS	129	144
IPR002454	Gamma_tubulin	PRINTS	36	49
IPR002454	Gamma_tubulin	PRINTS	201	221
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	SMART	92	230
IPR036525	Tubulin/FtsZ_GTPase_sf	SUPERFAMILY	22	89
IPR008280	Tub_FtsZ_C	SUPERFAMILY	90	251
IPR036525	Tubulin/FtsZ_GTPase_sf	SUPERFAMILY	22	89
IPR037103	Tubulin/FtsZ-like_C	Gene3D	113	218
IPR008280	Tub_FtsZ_C	SUPERFAMILY	90	251
IPR000217	Tubulin	PANTHER	21	252
IPR002454	Gamma_tubulin	PRINTS	94	105
IPR002454	Gamma_tubulin	PRINTS	129	144
IPR002454	Gamma_tubulin	PRINTS	36	49
IPR002454	Gamma_tubulin	PRINTS	201	221
IPR023123	Tubulin_C	Gene3D	219	261
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	SMART	92	230
IPR000217	Tubulin	PRINTS	217	245
IPR000217	Tubulin	PRINTS	36	56
IPR000217	Tubulin	PRINTS	22	35
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	Pfam	107	179
IPR036525	Tubulin/FtsZ_GTPase_sf	Gene3D	14	112

No CAZYmes available for this sequence

External Links

No external refs found!