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  5. Zm00001d014180_T004

Zm00001d014180_T004


Description : RNA-binding KH domain-containing protein


Gene families : OG_01_0021664 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0021664_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d014180_T004
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d014180_T004
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_376
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_202


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004088 KH_dom_type_1 Pfam 145 209
IPR004088 KH_dom_type_1 Pfam 535 594
IPR004088 KH_dom_type_1 Pfam 57 108
IPR036612 KH_dom_type_1_sf SUPERFAMILY 47 107
IPR036612 KH_dom_type_1_sf Gene3D 519 604
IPR036612 KH_dom_type_1_sf SUPERFAMILY 129 224
IPR036612 KH_dom_type_1_sf Gene3D 53 124
IPR036612 KH_dom_type_1_sf SUPERFAMILY 533 607
IPR004087 KH_dom SMART 53 126
IPR004087 KH_dom SMART 140 214
IPR004087 KH_dom SMART 530 598
IPR036612 KH_dom_type_1_sf Gene3D 141 217
IPR004088 KH_dom_type_1 Pfam 144 210
IPR004088 KH_dom_type_1 Pfam 535 594
IPR004088 KH_dom_type_1 Pfam 57 107
IPR036612 KH_dom_type_1_sf SUPERFAMILY 129 224
IPR036612 KH_dom_type_1_sf SUPERFAMILY 47 107
IPR036612 KH_dom_type_1_sf Gene3D 53 124
IPR036612 KH_dom_type_1_sf Gene3D 141 217
IPR036612 KH_dom_type_1_sf Gene3D 519 604
IPR036612 KH_dom_type_1_sf SUPERFAMILY 533 607
IPR004087 KH_dom SMART 53 126
IPR004087 KH_dom SMART 140 214
IPR004087 KH_dom SMART 530 598

No CAZYmes available for this sequence

No external refs found!