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  5. Zm00001d014271_T001

Zm00001d014271_T001


Description : centrin2


Gene families : OG_01_0002382 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002382_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d014271_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d014271_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_222
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_12


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom ProSiteProfiles 68 103
IPR002048 EF_hand_dom ProSiteProfiles 141 176
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 81 93
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 154 166
IPR002048 EF_hand_dom Pfam 35 98
IPR002048 EF_hand_dom Pfam 108 171
IPR002048 EF_hand_dom SMART 72 100
IPR002048 EF_hand_dom SMART 36 64
IPR002048 EF_hand_dom SMART 145 173
IPR002048 EF_hand_dom SMART 109 137
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 45 57
IPR002048 EF_hand_dom ProSiteProfiles 32 67
IPR002048 EF_hand_dom ProSiteProfiles 105 140
IPR002048 EF_hand_dom CDD 36 98
IPR011992 EF-hand-dom_pair SUPERFAMILY 24 172
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 118 130
IPR002048 EF_hand_dom Pfam 108 171
IPR002048 EF_hand_dom Pfam 35 97
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 118 130
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 45 57
IPR002048 EF_hand_dom CDD 36 98
IPR002048 EF_hand_dom SMART 72 100
IPR002048 EF_hand_dom SMART 36 64
IPR002048 EF_hand_dom SMART 145 173
IPR002048 EF_hand_dom SMART 109 137
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 154 166
IPR002048 EF_hand_dom ProSiteProfiles 68 103
IPR002048 EF_hand_dom ProSiteProfiles 141 176
IPR002048 EF_hand_dom ProSiteProfiles 32 67
IPR002048 EF_hand_dom ProSiteProfiles 105 140
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 81 93
IPR011992 EF-hand-dom_pair SUPERFAMILY 24 172

No CAZYmes available for this sequence

No external refs found!