Zm00001d014492_T001

Description : Ribonuclease H-like superfamily protein

Gene families : OG_01_0071909 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0071909_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d014492_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d014492_T001	No neighbors in network
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_294

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	RNA endonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	ISM	GOs from InterProScan
MF	GO:0004540	RNA nuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036397	RNaseH_sf	Gene3D	60	191
IPR044730	RNase_H-like_dom_plant	CDD	65	188
IPR012337	RNaseH-like_sf	SUPERFAMILY	63	199
IPR002156	RNaseH_domain	Pfam	66	189
IPR002156	RNaseH_domain	ProSiteProfiles	59	192
IPR044730	RNase_H-like_dom_plant	CDD	65	188
IPR036397	RNaseH_sf	Gene3D	60	191
IPR012337	RNaseH-like_sf	SUPERFAMILY	63	199
IPR002156	RNaseH_domain	Pfam	66	188

No CAZYmes available for this sequence

External Links

No external refs found!