Zm00001d014510_T002

Description : Y-family DNA polymerase H

Gene families : OG_01_0111677 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0111677_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d014510_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d014510_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_254
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_133

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001126	UmuC	Pfam	346	499
IPR043128	Rev_trsase/Diguanyl_cyclase	Gene3D	352	523
IPR001126	UmuC	ProSiteProfiles	350	531
IPR043502	DNA/RNA_pol_sf	SUPERFAMILY	346	554
IPR043502	DNA/RNA_pol_sf	SUPERFAMILY	346	554
IPR043128	Rev_trsase/Diguanyl_cyclase	Gene3D	352	523
IPR001126	UmuC	ProSiteProfiles	350	531
IPR001126	UmuC	Pfam	346	499

No CAZYmes available for this sequence

External Links

No external refs found!