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  5. Zm00001d014594_T001

Zm00001d014594_T001


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG_01_0000595 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000595_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d014594_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d014594_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_313
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_135


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035965 PAS-like_dom_sf SUPERFAMILY 56 173
IPR001810 F-box_dom ProSiteProfiles 222 268
IPR011498 Kelch_2 Pfam 544 590
IPR001810 F-box_dom Pfam 232 270
IPR000014 PAS NCBIfam 71 96
IPR000014 PAS CDD 56 172
IPR015915 Kelch-typ_b-propeller Gene3D 500 632
IPR000014 PAS SMART 46 115
IPR000014 PAS Pfam 58 172
IPR011043 Gal_Oxase/kelch_b-propeller SUPERFAMILY 306 622
IPR036047 F-box-like_dom_sf SUPERFAMILY 219 284
IPR001810 F-box_dom SMART 227 268
IPR015915 Kelch-typ_b-propeller Gene3D 298 499
IPR000014 PAS ProSiteProfiles 71 133
IPR000014 PAS TIGRFAM 71 96
IPR000014 PAS SMART 46 115
IPR035965 PAS-like_dom_sf SUPERFAMILY 56 173
IPR015915 Kelch-typ_b-propeller Gene3D 500 632
IPR000014 PAS ProSiteProfiles 71 133
IPR001810 F-box_dom ProSiteProfiles 222 268
IPR001810 F-box_dom SMART 227 268
IPR011043 Gal_Oxase/kelch_b-propeller SUPERFAMILY 306 622
IPR036047 F-box-like_dom_sf SUPERFAMILY 219 284
IPR011498 Kelch_2 Pfam 544 590
IPR015915 Kelch-typ_b-propeller Gene3D 298 499
IPR000014 PAS CDD 56 172
IPR000014 PAS Pfam 60 172
IPR001810 F-box_dom Pfam 230 270

No CAZYmes available for this sequence

No external refs found!