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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0016402 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016402_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d014599_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d014599_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_130 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 238 | 401 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 402 | 477 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 373 | 407 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 64 | 222 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 232 | 266 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 380 | 407 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 414 | 443 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 271 | 303 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 307 | 338 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 340 | 372 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 234 | 263 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 268 | 302 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 338 | 372 |
| IPR033443 | PPR_long | Pfam | 240 | 391 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 168 | 189 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 303 | 337 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 168 | 189 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 232 | 266 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 238 | 401 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 268 | 302 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 303 | 337 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 271 | 303 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 307 | 338 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 414 | 443 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 234 | 263 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 340 | 372 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 380 | 407 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 338 | 372 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 373 | 407 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 402 | 477 |
| IPR033443 | PPR_long | Pfam | 241 | 391 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 64 | 222 |
No CAZYmes available for this sequence
| No external refs found! |