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  5. Zm00001d014613_T001

Zm00001d014613_T001


Description : Xyloglucan endotransglucosylase/hydrolase family protein


Gene families : OG_01_0000345 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000345_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d014613_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d014613_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_21
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_169


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
CC GO:0005618 cell wall ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
BP GO:0006073 obsolete cellular glucan metabolic process ISM GOs from InterProScan
BP GO:0010411 xyloglucan metabolic process ISM GOs from InterProScan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity ISM GOs from InterProScan
BP GO:0042546 cell wall biogenesis ISM GOs from InterProScan
CC GO:0048046 apoplast ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR010713 XET_C Pfam 242 286
IPR000757 GH16 Pfam 26 206
IPR044791 Beta-glucanase/XTH PANTHER 13 287
IPR008264 Beta_glucanase PRINTS 115 128
IPR008264 Beta_glucanase PRINTS 133 150
IPR008264 Beta_glucanase PRINTS 57 75
IPR008263 GH16_AS ProSitePatterns 99 109
IPR000757 GH16 ProSiteProfiles 19 213
IPR013320 ConA-like_dom_sf SUPERFAMILY 25 288
IPR016455 XTH CDD 22 286
IPR016455 XTH PIRSF 1 290
IPR010713 XET_C Pfam 242 286
IPR044791 Beta-glucanase/XTH PANTHER 5 289
IPR016455 XTH PIRSF 1 290
IPR000757 GH16 ProSiteProfiles 19 213
IPR000757 GH16 Pfam 27 206
IPR008264 Beta_glucanase PRINTS 115 128
IPR008264 Beta_glucanase PRINTS 133 150
IPR008264 Beta_glucanase PRINTS 57 75
IPR016455 XTH CDD 22 286
IPR008263 GH16_AS ProSitePatterns 99 109
IPR013320 ConA-like_dom_sf SUPERFAMILY 25 288

No CAZYmes available for this sequence

No external refs found!