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  5. Zm00001d014875_T001

Zm00001d014875_T001


Description : Stabilizer of iron transporter SufD / Polynucleotidyl transferase


Gene families : OG_01_0000015 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000015_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d014875_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d014875_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_138
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_92


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003100 PAZ_dom ProSiteProfiles 340 455
IPR003165 Piwi Pfam 634 937
IPR014811 ArgoL1 SMART 287 339
IPR003165 Piwi SMART 633 954
IPR003165 Piwi ProSiteProfiles 633 935
IPR032472 ArgoL2 Pfam 481 527
IPR045246 Piwi_ago-like CDD 499 935
IPR036397 RNaseH_sf Gene3D 703 976
IPR032473 Argonaute_Mid_dom Pfam 538 611
IPR036085 PAZ_dom_sf SUPERFAMILY 144 494
IPR032474 Argonaute_N Pfam 142 278
IPR003100 PAZ_dom Pfam 364 468
IPR014811 ArgoL1 Pfam 289 338
IPR003100 PAZ_dom SMART 353 480
IPR012337 RNaseH-like_sf SUPERFAMILY 627 935
IPR045246 Piwi_ago-like CDD 499 935
IPR014811 ArgoL1 Pfam 289 337
IPR014811 ArgoL1 SMART 287 339
IPR003165 Piwi Pfam 634 937
IPR003100 PAZ_dom SMART 353 480
IPR003165 Piwi ProSiteProfiles 633 935
IPR032473 Argonaute_Mid_dom Pfam 538 611
IPR032472 ArgoL2 Pfam 481 527
IPR003100 PAZ_dom Pfam 352 467
IPR036397 RNaseH_sf Gene3D 703 976
IPR032474 Argonaute_N Pfam 142 278
IPR036085 PAZ_dom_sf SUPERFAMILY 144 494
IPR003165 Piwi SMART 633 954
IPR003100 PAZ_dom ProSiteProfiles 340 455
IPR012337 RNaseH-like_sf SUPERFAMILY 627 935

No CAZYmes available for this sequence

No external refs found!