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  5. Zm00001d015026_T001

Zm00001d015026_T001


Description : spermidine synthase 3


Gene families : OG_01_0000152 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000152_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d015026_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d015026_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_96
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_107


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR030373 PABS_CS ProSitePatterns 145 158
IPR037163 Spermidine_synt_N_sf Gene3D 45 118
IPR030374 PABS ProSiteProfiles 52 315
IPR029063 SAM-dependent_MTases_sf Gene3D 119 368
IPR035246 Spermidine_synt_N Pfam 73 120
IPR001045 Spermi_synthase NCBIfam 78 359
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 70 365
IPR001045 Spermi_synthase Hamap 53 365
IPR001045 Spermi_synthase PANTHER 46 365
IPR030374 PABS ProSiteProfiles 52 315
IPR001045 Spermi_synthase TIGRFAM 78 359
IPR001045 Spermi_synthase PANTHER 3 397
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 70 365
IPR030373 PABS_CS ProSitePatterns 145 158
IPR035246 Spermidine_synt_N Pfam 73 120
IPR001045 Spermi_synthase Hamap 53 365
IPR037163 Spermidine_synt_N_sf Gene3D 45 118

No CAZYmes available for this sequence

No external refs found!