Zm00001d015037_T002

Description : glutamate tRNA synthetase

Gene families : OG_01_0003496 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003496_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d015037_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d015037_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_119
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_51

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	ISM	GOs from InterProScan
MF	GO:0000166	nucleotide binding	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	ISM	GOs from InterProScan
MF	GO:0004818	glutamate-tRNA ligase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	ISM	GOs from InterProScan
BP	GO:0006424	glutamyl-tRNA aminoacylation	ISM	GOs from InterProScan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR020058	Glu/Gln-tRNA-synth_Ib_cat-dom	Pfam	49	365
IPR020751	aa-tRNA-synth_I_codon-bd_sub2	Gene3D	431	524
IPR014729	Rossmann-like_a/b/a_fold	Gene3D	42	374
IPR045462	aa-tRNA-synth_I_cd-bd	Pfam	399	519
IPR004527	Glu-tRNA-ligase_bac/mito	NCBIfam	49	521
IPR033910	GluRS_core	CDD	49	373
IPR000924	Glu/Gln-tRNA-synth	PRINTS	81	94
IPR000924	Glu/Gln-tRNA-synth	PRINTS	254	262
IPR000924	Glu/Gln-tRNA-synth	PRINTS	66	77
IPR000924	Glu/Gln-tRNA-synth	PRINTS	52	64
IPR000924	Glu/Gln-tRNA-synth	PRINTS	238	248
IPR008925	aa_tRNA-synth_I_cd-bd_sf	SUPERFAMILY	359	519
IPR004527	Glu-tRNA-ligase_bac/mito	Hamap	48	538
IPR001412	aa-tRNA-synth_I_CS	ProSitePatterns	55	66
IPR001412	aa-tRNA-synth_I_CS	ProSitePatterns	55	66
IPR020058	Glu/Gln-tRNA-synth_Ib_cat-dom	Pfam	49	365
IPR004527	Glu-tRNA-ligase_bac/mito	Hamap	48	538
IPR000924	Glu/Gln-tRNA-synth	PRINTS	81	94
IPR000924	Glu/Gln-tRNA-synth	PRINTS	254	262
IPR000924	Glu/Gln-tRNA-synth	PRINTS	66	77
IPR000924	Glu/Gln-tRNA-synth	PRINTS	52	64
IPR000924	Glu/Gln-tRNA-synth	PRINTS	238	248
IPR008925	aa_tRNA-synth_I_cd-bd_sf	SUPERFAMILY	359	519
IPR020751	aa-tRNA-synth_I_codon-bd_sub2	Gene3D	431	524
IPR045462	aa-tRNA-synth_I_cd-bd	Pfam	386	519
IPR004527	Glu-tRNA-ligase_bac/mito	TIGRFAM	49	521
IPR014729	Rossmann-like_a/b/a_fold	Gene3D	42	374
IPR033910	GluRS_core	CDD	49	373

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d015037_T002

Expression Profile

Co-expression Networks

Functional Annotation