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  5. Zm00001d015203_T005

Zm00001d015203_T005


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0006432 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006432_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d015203_T005
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d015203_T005
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_257
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_184


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 35 215
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 644 874
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 267 643
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 264 646
IPR001680 WD40_rpt SMART 605 645
IPR001680 WD40_rpt SMART 66 122
IPR001680 WD40_rpt SMART 768 813
IPR001680 WD40_rpt SMART 729 766
IPR001680 WD40_rpt SMART 134 175
IPR001680 WD40_rpt SMART 296 335
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 83 870
IPR039694 WDR11 PANTHER 27 1351
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 35 215
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 644 874
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 83 870
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 267 643
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 264 646
IPR001680 WD40_rpt SMART 605 645
IPR001680 WD40_rpt SMART 768 813
IPR001680 WD40_rpt SMART 66 122
IPR001680 WD40_rpt SMART 729 766
IPR001680 WD40_rpt SMART 134 175
IPR001680 WD40_rpt SMART 296 335
IPR039694 WDR11 PANTHER 25 1350

No CAZYmes available for this sequence

No external refs found!