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  5. Zm00001d015208_T003

Zm00001d015208_T003


Description : Cleavage and polyadenylation specificity factor (CPSF) A subunit protein


Gene families : OG_01_0004751 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004751_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d015208_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d015208_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_250
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_235


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 539 1068
IPR018846 Cleavage/polyA-sp_fac_asu_N Pfam 87 601
IPR004871 Cleavage/polyA-sp_fac_asu_C Pfam 876 1195
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 13 413
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 452 779
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 4 1140
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 452 779
IPR018846 Cleavage/polyA-sp_fac_asu_N Pfam 87 601
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 13 413
IPR004871 Cleavage/polyA-sp_fac_asu_C Pfam 876 1195
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 4 1140
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 539 1068

No CAZYmes available for this sequence

No external refs found!