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  5. Zm00001d015459_T003

Zm00001d015459_T003


Description : 4-coumarate:CoA ligase 2


Gene families : OG_01_0000789 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000789_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d015459_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d015459_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_54
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_137


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR042099 ANL_N_sf Gene3D 20 482
IPR045851 AMP-bd_C_sf Gene3D 483 584
IPR000873 AMP-dep_Synth/Lig_com Pfam 55 341
IPR000873 AMP-dep_Synth/Lig_com Pfam 373 446
IPR025110 AMP-bd_C Pfam 497 572
IPR020845 AMP-binding_CS ProSitePatterns 200 211
IPR025110 AMP-bd_C Pfam 497 572
IPR020845 AMP-binding_CS ProSitePatterns 200 211
IPR000873 AMP-dep_Synth/Lig_com Pfam 55 342
IPR000873 AMP-dep_Synth/Lig_com Pfam 372 488
IPR045851 AMP-bd_C_sf Gene3D 483 584
IPR042099 ANL_N_sf Gene3D 20 482

No CAZYmes available for this sequence

No external refs found!