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  5. Zm00001d015890_T002

Zm00001d015890_T002


Description : Sec1/munc18-like (SM) proteins superfamily


Gene families : OG_01_0000139 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000139_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d015890_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d015890_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_210
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_258


Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR043154 Sec-1-like_dom1 Gene3D 10 145
IPR001619 Sec1-like PANTHER 15 662
IPR001619 Sec1-like PIRSF 12 674
IPR027482 Sec1-like_dom2 Gene3D 172 665
IPR001619 Sec1-like Pfam 42 663
IPR036045 Sec1-like_sf SUPERFAMILY 15 667
IPR043127 Sec-1-like_dom3a Gene3D 284 406
IPR043154 Sec-1-like_dom1 Gene3D 10 145
IPR001619 Sec1-like Pfam 42 663
IPR043127 Sec-1-like_dom3a Gene3D 284 406
IPR001619 Sec1-like PIRSF 12 674
IPR001619 Sec1-like PANTHER 17 673
IPR027482 Sec1-like_dom2 Gene3D 172 665
IPR036045 Sec1-like_sf SUPERFAMILY 15 667

No CAZYmes available for this sequence

No external refs found!