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  5. Zm00001d015974_T002

Zm00001d015974_T002


Description : RNI-like superfamily protein


Gene families : OG_01_0004621 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004621_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d015974_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d015974_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_133
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_93


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032675 LRR_dom_sf Gene3D 240 357
IPR032675 LRR_dom_sf Gene3D 157 239
IPR032675 LRR_dom_sf Gene3D 46 156
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 167 192
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 219 244
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 193 218
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 141 166
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 269 294
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 295 320
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 115 140
IPR001611 Leu-rich_rpt Pfam 167 190
IPR001611 Leu-rich_rpt Pfam 117 136
IPR001611 Leu-rich_rpt Pfam 272 292
IPR001611 Leu-rich_rpt Pfam 117 136
IPR001611 Leu-rich_rpt Pfam 166 190
IPR001611 Leu-rich_rpt Pfam 272 292
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 167 192
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 219 244
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 193 218
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 141 166
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 269 294
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 295 320
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 115 140
IPR032675 LRR_dom_sf Gene3D 157 239
IPR032675 LRR_dom_sf Gene3D 46 156
IPR032675 LRR_dom_sf Gene3D 240 357

No CAZYmes available for this sequence

No external refs found!